Publications

Showing records 1 - 20 (of 110)

Publication: Book Item (Buchkap., Lexikonartikel, jur. Kommentierung, Beiträge in Sammelbänden etc.)

ID	Author	Year	Title	Publisher
4619557	van Nimwegen, Erik	2006	Scaling laws in the functional content of genomes: Fundamental constants of evolution?	Springer
2836805	Jug, Florian; Pietzsch, Tobias; Kainmüller, Dagmar; Funke, Jan; Kaiser, Matthias; van Nimwegen, Erik; Rother, Carsten; Myers, Gene	2014	Optimal joint segmentation and tracking of Escherichia coli in the mother machine	Springer

Publication: JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)

ID	Author	Year	Title	Publisher
156670	van Nimwegen, Erik	2007	Finding regulatory elements and regulatory motifs : a general probabilistic framework	BMC Bioinformatics
156679	Sewer, Alain; Paul, Nicodème; Landgraf, Pablo; Aravin, Alexei; Pfeffer, Sébastien; Brownstein, Michael J; Tuschl, Thomas; van Nimwegen, Erik; Zavolan, Mihaela	2005	Identification of clustered microRNAs using an ab initio prediction method	BMC bioinformatics
156671	Gaidatzis, Dimos; van Nimwegen, Erik; Hausser, Jean; Zavolan, Mihaela	2007	Inference of miRNA targets using evolutionary conservation and pathway analysis	BMC bioinformatics
1618774	Hofsteenge, Niels; van Nimwegen, Erik; Silander, Olin K	2013	Quantitative analysis of persister fractions suggests different mechanisms of formation among environmental isolates of E. coli	BMC microbiology
1166189	Arnold, Phil; Erb, Ionas; Pachkov, Mikhail; Molina, Nacho; van Nimwegen, Erik	2012	MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences	Bioinformatics
4619431	Sinha, Saurabh; van Nimwegen, Erik; Siggia, Eric D.	2003	A probabilistic method to detect regulatory modules	Bioinformatics
156663	Molina, Nacho; van Nimwegen, Erik	2008	The evolution of domain-content in bacterial genomes	Biology Direct
2055425	Meier-Abt, Fabienne; Milani, Emanuela; Roloff, Tim; Brinkhaus, Heike; Duss, Stephan; Meyer, Dominique S.; Klebba, Ina; Balwierz, Piotr J.; van Nimwegen, Erik; Bentires-Alj, Mohamed	2013	Parity induces differentiation and reduces Wnt/Notch signaling ratio and proliferation potential of basal stem/progenitor cells isolated from mouse mammary epithelium	Breast cancer research
2288876	Oprea, Mihaela; van Nimwegen, Erik; Perelson, Alan S.	2000	Dynamics of one-pass germinal center models: implications for affinity maturation	Bulletin of Mathematical Biology
4619447	van Nimwegen, Erik; Crutchfield, James P.	2000	Metastable evolutionary dynamics: Crossing fitness barriers or escaping via neutral paths?	Bulletin of Mathematical Biology
2055424	Tiwari, Neha; Tiwari, Vijay K; Waldmeier, Lorenz; Balwierz, Piotr J; Arnold, Phil; Pachkov, Mikhail; Meyer-Schaller, Nathalie; Schübeler, Dirk; van Nimwegen, Erik; Christofori, Gerhard	2013	Sox4 is a master regulator of epithelial-mesenchymal transition by controlling ezh2 expression and epigenetic reprogramming	Cancer cell
490900	Ravasi, Timothy; Suzuki, Harukazu; Cannistraci, Carlo Vittorio; Katayama, Shintaro; Bajic, Vladimir B; Tan, Kai; Akalin, Altuna; Schmeier, Sebastian; Kanamori-Katayama, Mutsumi; Bertin, Nicolas; Carninci, Piero; Daub, Carsten O; Forrest, Alistair R R; Gough, Julian; Grimmond, Sean; Han, Jung-Hoon; Hashimoto, Takehiro; Hide, Winston; Hofmann, Oliver; Kamburov, Atanas; Kaur, Mandeep; Kawaji, Hideya; Kubosaki, Atsutaka; Lassmann, Timo; van Nimwegen, Erik; MacPherson, Cameron Ross; Ogawa, Chihiro; Radovanovic, Aleksandar; Schwartz, Ariel; Teasdale, Rohan D; Tegnér, Jesper; Lenhard, Boris; Teichmann, Sarah A; Arakawa, Takahiro; Ninomiya, Noriko; Murakami, Kayoko; Tagami, Michihira; Fukuda, Shiro; Imamura, Kengo; Kai, Chikatoshi; Ishihara, Ryoko; Kitazume, Yayoi; Kawai, Jun; Hume, David A; Ideker, Trey; Hayashizaki, Yoshihide	2010	An atlas of combinatorial transcriptional regulation in mouse and man	Cell
4619456	van Nimwegen, Erik; Crutchfield, James P.	2000	Optimizing epochal evolutionary search: population-size independent theory	Computer Methods in Applied Mechanics and Engineering
156674	Zavolan, Mihaela; van Nimwegen, Erik	2006	The types and prevalence of alternative splice forms	Current opinion in structural biology
156665	Chern, Tzu-Ming; Paul, Nicodeme; van Nimwegen, Erik; Zavolan, Mihaela	2008	Computational analysis of full-length cDNAs reveals frequent coupling between transcriptional and splicing programs	DNA research
1215024	Arner, Erik; Mejhert, Niklas; Kulyté, Agné; Balwierz, Piotr J; Pachkov, Mikhail; Cormont, Mireille; Lorente-Cebrián, Silvia; Ehrlund, Anna; Laurencikiene, Jurga; Hedén, Per; Dahlman-Wright, Karin; Tanti, Jean-François; Hayashizaki, Yoshihide; Rydén, Mikael; Dahlman, Ingrid; van Nimwegen, Erik; Daub, Carsten O; Arner, Peter	2012	Adipose tissue microRNAs as regulators of CCL2 production in human obesity	Diabetes
490899	Summers, Kim M; Raza, Sobia; van Nimwegen, Erik; Freeman, Thomas C; Hume, David A	2010	Co-expression of FBN1 with mesenchyme-specific genes in mouse cell lines : implications for phenotypic variability in Marfan syndrome	European journal of human genetics
2326176	Vigano, Maria Alessandra; Ivanek, Robert; Balwierz, Piotr; Berninger, Philipp; van Nimwegen, Erik; Karjalainen, Klaus; Rolink, Antonius	2014	An epigenetic profile of early T-cell development from multipotent progenitors to committed T-cell descendants.	European journal of immunology

Showing records 1 - 20 (of 110)