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Molecular Dynamics with Conformationally Dependent, Distributed Charges
JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
 
ID 4660807
Author(s) Boittier, Eric D.; Devereux, Mike; Meuwly, Markus
Author(s) at UniBasel Meuwly, Markus
Year 2022
Title Molecular Dynamics with Conformationally Dependent, Distributed Charges
Journal Journal of Chemical Theory and Computation
Volume 18
Number 12
Pages / Article-Number 7544-7554
Mesh terms Molecular Dynamics Simulation; Static Electricity; Water, chemistry; Anisotropy
Abstract Accounting for geometry-induced changes in the electronic distribution in molecular simulation is important for capturing effects such as charge flow, charge anisotropy, and polarization. Multipolar force fields have demonstrated their ability to correctly represent chemically significant features such as anisotropy and sigma holes. It has also been shown that off-center point charges offer a compact alternative with similar accuracy. Here, it is demonstrated that allowing relocation of charges within a minimally distributed charge model (MDCM) with respect to their reference atoms is a viable route to capture changes in the molecular charge distribution depending on geometry, i.e., intramolecular polarization. The approach, referred to as “flexible MDCM” (fMDCM), is validated on a number of small molecules and provides accuracies in the electrostatic potential (ESP) of 0.5 kcal/mol on average compared with reference data from electronic structure calculations, whereas MDCM and point charges have root mean squared errors of a factor of 2 to 5 higher. In addition, MD simulations in the NVE ensemble using fMDCM for a box of flexible water molecules with periodic boundary conditions show a width of 0.1 kcal/mol for the fluctuation around the mean at 300 K on the 10 ns time scale. For water, the equilibrium valence angle in the gas phase is found to increase by 2° for simulations in the condensed phase which is consistent with experiment. The accuracy in capturing the geometry dependence of the ESP together with the long-time stability in energy conserving simulations makes fMDCM a promising tool to introduce advanced electrostatics into atomistic simulations.
Publisher American Chemical Society
ISSN/ISBN 1549-9618 ; 1549-9626
edoc-URL https://edoc.unibas.ch/93167/
Full Text on edoc No
Digital Object Identifier DOI 10.1021/acs.jctc.2c00693
PubMed ID http://www.ncbi.nlm.nih.gov/pubmed/36346403
ISI-Number WOS:000884766700001
Document type (ISI) Journal Article
 
   

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