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Learning the space-time phase diagram of bacterial swarm expansion
JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
 
ID 4621446
Author(s) Jeckel, Hannah; Jelli, Eric; Hartmann, Raimo; Singh, Praveen K.; Mok, Rachel; Totz, Jan Frederik; Vidakovic, Lucia; Eckhardt, Bruno; Dunkel, Jörn; Drescher, Knut
Author(s) at UniBasel Drescher, Knut
Year 2019
Title Learning the space-time phase diagram of bacterial swarm expansion
Journal Proceedings of the National Academy of Sciences of the United States of America
Volume 116
Number 5
Pages / Article-Number 1489-1494
Keywords biofilm; cell–cell interactions; collective behavior; microbiology; swarming
Mesh terms Bacillus subtilis, physiology; Cell Communication, physiology; Cell Proliferation, physiology; Kinetics; Machine Learning; Movement, physiology
Abstract Coordinated dynamics of individual components in active matter are an essential aspect of life on all scales. Establishing a comprehensive, causal connection between intracellular, intercellular, and macroscopic behaviors has remained a major challenge due to limitations in data acquisition and analysis techniques suitable for multiscale dynamics. Here, we combine a high-throughput adaptive microscopy approach with machine learning, to identify key biological and physical mechanisms that determine distinct microscopic and macroscopic collective behavior phases which develop as; Bacillus subtilis; swarms expand over five orders of magnitude in space. Our experiments, continuum modeling, and particle-based simulations reveal that macroscopic swarm expansion is primarily driven by cellular growth kinetics, whereas the microscopic swarming motility phases are dominated by physical cell-cell interactions. These results provide a unified understanding of bacterial multiscale behavioral complexity in swarms.
Publisher National Academy of Sciences
ISSN/ISBN 0027-8424 ; 1091-6490
edoc-URL https://edoc.unibas.ch/83579/
Full Text on edoc Available
Digital Object Identifier DOI 10.1073/pnas.1811722116
PubMed ID http://www.ncbi.nlm.nih.gov/pubmed/30635422
ISI-Number WOS:000456944600010
Document type (ISI) Journal Article
 
   

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02/05/2024