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Conformations and cryo-force spectroscopy of spray-deposited single-strand DNA on gold
JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
 
ID 4500731
Author(s) Pawlak, Rémy; Vilhena, J. G.; Hinaut, Antoine; Meier, Tobias; Glatzel, Thilo; Baratoff, Alexis; Gnecco, Enrico; Pérez, Rubén; Meyer, Ernst
Author(s) at UniBasel Glatzel, Thilo
Pawlak, Rémy
Vilhena Albuquerque D'Orey, José Guilherme
Meier, Tobias
Baratoff, Alexis
Meyer, Ernst
Hinaut, Antoine
Year 2019
Title Conformations and cryo-force spectroscopy of spray-deposited single-strand DNA on gold
Journal Nature Communications
Volume 10
Number 1
Pages / Article-Number 685
Mesh terms Cryoelectron Microscopy, methods; DNA, Single-Stranded, ultrastructure; Gold, chemistry; Microscopy, Atomic Force; Molecular Conformation
Abstract Cryo-electron microscopy can determine the structure of biological matter in vitrified liquids. However, structure alone is insufficient to understand the function of native and engineered biomolecules. So far, their mechanical properties have mainly been probed at room temperature using tens of pico-newton forces with a resolution limited by thermal fluctuations. Here we combine force spectroscopy and computer simulations in cryogenic conditions to quantify adhesion and intra-molecular properties of spray-deposited single-strand DNA oligomers on Au(111). Sub-nanometer resolution images reveal folding conformations confirmed by simulations. Lifting shows a decay of the measured stiffness with sharp dips every 0.2-0.3âEuro‰nm associated with the sequential peeling and detachment of single nucleotides. A stiffness of 30-35âEuro‰NâEuro‰mâˆ'1 per stretched repeat unit is deduced in the nano-newton range. This combined study suggests how to better control cryo-force spectroscopy of adsorbed heterogeneous (bio)polymer and to potentially enable single-base recognition in DNA strands only few nanometers long.
Publisher Nature Publishing Group
ISSN/ISBN 2041-1723
edoc-URL https://edoc.unibas.ch/70125/
Full Text on edoc Available
Digital Object Identifier DOI 10.1038/s41467-019-08531-4
PubMed ID http://www.ncbi.nlm.nih.gov/pubmed/30737410
ISI-Number 000458176000002
Document type (ISI) Journal Article
 
   

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