Data Entry: Please note that the research database will be replaced by UNIverse by the end of October 2023. Please enter your data into the system https://universe-intern.unibas.ch. Thanks

Login for users with Unibas email account...

Login for registered users without Unibas email account...

 
Focus: The interface between data collection and data processing in cryo-EM
JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
 
ID 3931644
Author(s) Biyani, Nikhil; Righetto, Ricardo D.; McLeod, Robert; Caujolle-Bert, Daniel; Castano-Diez, Daniel; Goldie, Kenneth N.; Stahlberg, Henning
Author(s) at UniBasel Stahlberg, Henning
Goldie, Kenneth
Castano Diez, Daniel
Year 2017
Title Focus: The interface between data collection and data processing in cryo-EM
Journal Journal of Structural Biology
Volume 198
Number 2
Pages / Article-Number 124-133
Keywords Automated data collection; Cryo-EM; Drift correction; High throughput image processing
Mesh terms Automation; Cryoelectron Microscopy, methods; Image Processing, Computer-Assisted, methods; Signal-To-Noise Ratio; Software; User-Computer Interface
Abstract We present a new software package called Focus that interfaces cryo-transmission electron microscopy (cryo-EM) data collection with computer image processing. Focus creates a user-friendly environment to import and manage data recorded by direct electron detectors and perform elemental image processing tasks in a high-throughput manner while new data is being acquired at the microscope. It provides the functionality required to remotely monitor the progress of data collection and data processing, which is essential now that automation in cryo-EM allows a steady flow of images of single particles, two-dimensional crystals, or electron tomography data to be recorded in overnight sessions. The rapid detection of any errors that may occur greatly increases the productivity of recording sessions at the electron microscope.
Publisher Elsevier
ISSN/ISBN 1047-8477 ; 1095-8657
edoc-URL http://edoc.unibas.ch/56292/
Full Text on edoc No
Digital Object Identifier DOI 10.1016/j.jsb.2017.03.007
PubMed ID http://www.ncbi.nlm.nih.gov/pubmed/28344036
ISI-Number WOS:000402026300007
Document type (ISI) Journal Article
 
   

MCSS v5.8 PRO. 0.350 sec, queries - 0.000 sec ©Universität Basel  |  Impressum   |    
02/05/2024