Data Entry: Please note that the research database will be replaced by UNIverse by the end of October 2023. Please enter your data into the system Thanks

Login for users with Unibas email account...

Login for registered users without Unibas email account...

A semi-automatic method for the quantification of spinal cord atrophy
ConferencePaper (Artikel, die in Tagungsbänden erschienen sind)
ID 3223390
Author(s) Pezold, Simon; Ammann, Michael; Weier, Katrin; Fundana, Ketut; Radue, Ernst W.; Sprenger, Till; Cattin, Philippe C.
Author(s) at UniBasel Cattin, Philippe Claude
Pezold, Simon
Year 2014
Title A semi-automatic method for the quantification of spinal cord atrophy
Book title (Conference Proceedings) Computational methods and clinical applications for spine imaging : proceedings of the Workshop held at the 16th International Conference on Medical Image Computing and Computer Assisted Intervention, September 22-26, 2013, Nagoya, Japan
Place of Conference Nagoya, Japan
Year of Conference 2013
Publisher Springer International Publishing
Place of Publication Cham
Pages 143-155
ISSN/ISBN 978-3-319-07268-5 ; 978-3-319-07269-2
Abstract Due to its high flexibility, the spinal cord is a particularly challenging part of the central nervous system for the quantification of nervous tissue changes. In this paper, a novel semi-automatic method is presented that reconstructs the cord surface from MR images and reformats it to slices that lie perpendicular to its centerline. In this way, meaningful comparisons of cord cross-sectional areas are possible. Furthermore, the method enables to quantify the complete upper cervical cord volume. Our approach combines graph cut for presegmentation, edge detection in intensity profiles for segmentation refinement, and the application of starbursts for reformatting the cord surface. Only a minimum amount of user input and interaction time is required. To quantify the limits and to demonstrate the robustness of our approach, its accuracy is validated in a phantom study and its precision is shown in a volunteer scan–rescan study. The method’s reproducibility is compared to similar published quantification approaches. The application to clinical patient data is presented by comparing the cord cross-sections of a group of multiple sclerosis patients with those of a matched control group, and by correlating the upper cervical cord volumes of a large MS patient cohort with the patients’ disability status. Finally, we demonstrate that the geometric distortion correction of the MR scanner is crucial when quantitatively evaluating spinal cord atrophy.
Series title Lecture Notes in Computational Vision and Biomechanics
Number 17
Full Text on edoc No
Digital Object Identifier DOI 10.1007/978-3-319-07269-2_13

MCSS v5.8 PRO. 0.368 sec, queries - 0.000 sec ©Universität Basel  |  Impressum   |