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The complete mitochondrial genome of the invasive Ponto-Caspian goby Ponticola kessleri obtained from high-throughput sequencing using the Ion Torrent Personal Genome Machine
JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
 
ID 2832050
Author(s) Kalchhauser, Irene; Kutschera, Verena E.; Burkhardt-Holm, Patricia
Author(s) at UniBasel Holm, Patricia
Adrian-Kalchhauser, Irene
Year 2016
Title The complete mitochondrial genome of the invasive Ponto-Caspian goby Ponticola kessleri obtained from high-throughput sequencing using the Ion Torrent Personal Genome Machine
Journal Mitochondrial DNA
Volume 27
Number 3
Pages / Article-Number 1887-1889
Keywords Bighead goby, high throughput sequencing, invasive, mitochondrial genome, Ponticola kessleri, Rhine
Abstract We report the first complete mitochondrial genome (mitogenome) of an invasive Ponto-Caspian goby, Ponticola kessleri (bighead goby, Gu¨ nther 1891). Ion Torrent PGM sequencing oftotal DNA from two individuals yielded a contig of 16,971 bp, with overlapping ends located inthe repetitive control region, which was validated using Sanger sequencing. The finalmitogenome of Ponticola kessleri has a size of 16,890 bp and contains the expected geneconfiguration of 13 protein-coding genes, 2 rRNA genes and 22 tRNA genes. In a comparisonwith complete mitogenomes from other goby species, we identified a translocation of tRNAGluin the mitogenome of P. kessleri. Rearrangements are unique and rare events, and can thus providephylogenetic information.
Publisher Taylor & Francis
ISSN/ISBN 1940-1736 ; 1940-1744
edoc-URL http://edoc.unibas.ch/dok/A6337964
Full Text on edoc Restricted
Digital Object Identifier DOI 10.3109/19401736.2014.971272
ISI-Number WOS:000377538000141
Document type (ISI) Article
 
   

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