Publications
Showing records 1 - 15 (of 15)
Publication: JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
ID
Author
Year
Title
Publisher
4697907 Durairaj, Janani; Waterhouse, Andrew M.; Mets, Toomas; Brodiazhenko, Tetiana; Abdullah, Minhal; Studer, Gabriel; Tauriello, Gerardo; Akdel, Mehmet; Andreeva, Antonina; Bateman, Alex; Tenson, Tanel; Hauryliuk, Vasili; Schwede, Torsten; Pereira, Joana
2023
Uncovering new families and folds in the natural protein universe
Nature
4615143 Studer, Gabriel; Tauriello, Gerardo; Bienert, Stefan; Biasini, Marco; Johner, Niklaus; Schwede, Torsten
2021
ProMod3-A versatile homology modelling toolbox
PLoS Computational Biology
4626784 Kryshtafovych, Andriy; Moult, John; Billings, Wendy M.; Della Corte, Dennis; Fidelis, Krzysztof; Kwon, Sohee; Olechnovič, Kliment; Seok, Chaok; Venclovas, Česlovas; Won, Jonghun; Casp-Covid participants,
2021
Modeling SARS-CoV-2 proteins in the CASP-commons experiment
Proteins: Structure, Function, and Bioinformatics
4605286 Gervasoni, Silvia; Vistoli, Giulio; Talarico, Carmine; Manelfi, Candida; Beccari, Andrea R.; Studer, Gabriel; Tauriello, Gerardo; Waterhouse, Andrew Mark; Schwede, Torsten; Pedretti, Alessandro
2020
A Comprehensive Mapping of the Druggable Cavities within the SARS-CoV-2 Therapeutically Relevant Proteins by Combining Pocket and Docking Searches as Implemented in Pockets 2.0
International journal of molecular sciences
4515535 Haas, Juergen; Gumienny, Rafal; Barbato, Alessandro; Ackermann, Flavio; Tauriello, Gerardo; Bertoni, Martino; Studer, Gabriel; Smolinski, Anna; Schwede, Torsten
2019
Introducing "best single template" models as reference baseline for the Continuous Automated Model Evaluation (CAMEO)
Proteins
4516200 Studer, Gabriel; Rempfer, Christine; Waterhouse, Andrew M.; Gumienny, Rafal; Haas, Juergen; Schwede, Torsten
2019
QMEANDisCo - Distance Constraints Applied on Model Quality Estimation
Bioinformatics
4511635 Cheng, Jianlin; Choe, Myong-Ho; Elofsson, Arne; Han, Kun-Sop; Hou, Jie; Maghrabi, Ali H. A.; McGuffin, Liam J.; Menéndez-Hurtado, David; Olechnovič, Kliment; Schwede, Torsten; Studer, Gabriel; Uziela, Karolis; Venclovas, Česlovas; Wallner, Björn
2019
Estimation of model accuracy in CASP13
Proteins
4487353 Studer, Gabriel; Tauriello, Gerardo; Bienert, Stefan; Waterhouse, Andrew Mark; Bertoni, Martino; Bordoli, Lorenza; Schwede, Torsten; Lepore, Rosalba
2019
Modeling of Protein Tertiary and Quaternary Structures Based on Evolutionary Information
Methods in Molecular Biology
4055357 Haas, Jürgen; Barbato, Alessandro; Behringer, Dario; Studer, Gabriel; Roth, Steven; Bertoni, Martino; Mostaguir, Khaled; Gumienny, Rafal; Schwede, Torsten
2018
Continuous Automated Model Evaluation (CAMEO) Complementing the Critical Assessment of Structure Prediction in CASP12
Proteins
4479749 Waterhouse, Andrew; Bertoni, Martino; Bienert, Stefan; Studer, Gabriel; Tauriello, Gerardo; Gumienny, Rafal; Heer, Florian T.; de Beer, Tjaart A. P.; Rempfer, Christine; Bordoli, Lorenza; Lepore, Rosalba; Schwede, Torsten
2018
SWISS-MODEL: homology modelling of protein structures and complexes
Nucleic acids research
3676032 Bienert, Stefan; Waterhouse, Andrew; de Beer, Tjaart A. P.; Tauriello, Gerardo; Studer, Gabriel; Bordoli, Lorenza; Schwede, Torsten
2017
The SWISS-MODEL Repository - new features and functionality
Nucleic Acids Research
2689815 Studer, Gabriel; Biasini, Marco; Schwede, Torsten
2014
Assessing the local structural quality of transmembrane protein models using statistical potentials (QMEANBrane)
Bioinformatics
2562978 Biasini, Marco; Bienert, Stefan; Waterhouse, Andrew; Arnold, Konstantin; Studer, Gabriel; Schmidt, Tobias; Kiefer, Florian; Cassarino, Tiziano Gallo; Bertoni, Martino; Bordoli, Lorenza; Schwede, Torsten
2014
SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information
Nucleic Acids Research
Publication: Discussion paper / Internet publication
ID
Author
Year
Title
Publisher
4665269 Durairaj, Janani; Waterhouse, Andrew M.; Mets, Toomas; Brodiazhenko, Tetiana; Abdullah, Minhal; Studer, Gabriel; Akdel, Mehmet; Andreeva, Antonina; Bateman, Alex; Tenson, Tanel; Hauryliuk, Vasili; Schwede, Torsten; Pereira, Joana
2023
What is hidden in the darkness? Deep-learning assisted large-scale protein family curation uncovers novel protein families and folds
Cold Spring Harbor Laboratory
4665271 Pantolini, Lorenzo; Studer, Gabriel; Pereira, Joana; Durairaj, Janani; Schwede, Torsten
2022
Embedding-based alignment: combining protein language models and alignment approaches to detect structural similarities in the twilight-zone
Cold Spring Harbor Laboratory
Showing records 1 - 15 (of 15)
