Publications
Showing records 1 - 19 (of 19)
Publication: JournalArticle (Originalarbeit in einer wissenschaftlichen Zeitschrift)
ID
Author
Year
Title
Publisher
4462735
Gruber, Andreas J.; Schmidt, Ralf; Ghosh, Souvik; Martin, Georges; Gruber, Andreas R.; van Nimwegen, Erik; Zavolan, Mihaela
2018
Discovery of physiological and cancer-related regulators of 3' UTR processing with KAPAC
Genome biology
4487372
Gruber, Andreas J.; Gypas, Foivos; Riba, Andrea; Schmidt, Ralf; Zavolan, Mihaela
2018
Terminal exon characterization with TECtool reveals an abundance of cell-specific isoforms
Nature methods
4487357
Rzepiela, Andrzej J.; Ghosh, Souvik; Breda, Jeremie; Vina-Vilaseca, Arnau; Syed, Afzal P.; Gruber, Andreas J.; Eschbach, Katja; Beisel, Christian; van Nimwegen, Erik; Zavolan, Mihaela
2018
Single-cell mRNA profiling reveals the hierarchical response of miRNA targets to miRNA induction
Molecular systems biology
3975704
Martin, Georges; Schmidt, Ralf; Gruber, Andreas J.; Ghosh, Souvik; Keller, Walter; Zavolan, Mihaela
2017
3' End Sequencing Library Preparation with A-seq2
Journal of Visualized Experiments
3822861
Dimitrova, Yoana; Gruber, Andreas J.; Mittal, Nitish; Ghosh, Souvik; Dimitriades, Beatrice; Mathow, Daniel; Grandy, William Aaron; Christofori, Gerhard; Zavolan, Mihaela
2017
TFAP2A is a component of the ZEB1/2 network that regulates TGFB1-induced epithelial to mesenchymal transition
Biology Direct
3567622
Gruber, Andreas J.; Schmidt, Ralf; Gruber, Andreas R.; Martin, Georges; Ghosh, Souvik; Belmadani, Manuel; Keller, Walter; Zavolan, Mihaela
2016
A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation
Genome Research
3589708
Jorjani, Hadi; Kehr, Stephanie; Jedlinski, Dominik J.; Gumienny, Rafal; Hertel, Jana; Stadler, Peter F.; Zavolan, Mihaela; Gruber, Andreas R.
2016
An updated human snoRNAome
Nucleic Acids Research
3499763
Janowski, Robert; Heinz, Gitta A; Schlundt, Andreas; Wommelsdorf, Nina; Brenner, Sven; Gruber, Andreas R; Blank, Michael; Buch, Thorsten; Buhmann, Raymund; Zavolan, Mihaela; Niessing, Dierk; Heissmeyer, Vigo; Sattler, Michael
2016
Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40
Nature communications
3208069
Kanitz, Alexander; Gypas, Foivos; Gruber, Andreas J; Gruber, Andreas R; Martin, Georges; Zavolan, Mihaela
2015
Comparative assessment of methods for the computational inference of transcript isoform abundance from RNA-seq data
Genome biology
2420414
Balwierz, Piotr J; Pachkov, Mikhail; Arnold, Phil; Gruber, Andreas J; Zavolan, Mihaela; van Nimwegen, Erik
2014
ISMARA: Automated modeling of genomic signals as a democracy of regulatory motifs
Genome research
2730701
Schönemann, Lars; Kühn, Uwe; Martin, Georges; Schäfer, Peter; Gruber, Andreas R; Keller, Walter; Zavolan, Mihaela; Wahle, Elmar
2014
Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33
Genes & development
2730703
Gruber, Andreas R
2014
RNA Polymerase III promoter screen uncovers a novel noncoding RNA family conserved in Caenorhabditis and other clade V nematodes
Gene
2664019
Gruber, Andreas J.; Grandy, William A.; Balwierz, Piotr J.; Dimitrova, Yoana A.; Pachkov, Mikhail; Ciaudo, Constance; van Nimwegen, Erik; Zavolan, Mihaela
2014
Embryonic stem cell-specific microRNAs contribute to pluripotency by inhibiting regulators of multiple differentiation pathways
Nucleic Acids Research
2799813
Dill, Michael T.; Makowska, Zuzanna; Trincucci, Gaia; Gruber, Andreas J.; Vogt, Julia E.; Filipowicz, Magdalena; Calabrese, Diego; Krol, Ilona; Lau, Daryl T.; Terracciano, Luigi; van Nimwegen, Erik; Roth, Volker; Heim, Markus H.
2014
Pegylated IFN-α regulates hepatic gene expression through transient Jak/STAT activation
Journal of Clinical Investigation
2055453
Kishore, Shivendra; Gruber, Andreas R; Jedlinski, Dominik J; Syed, Afzal P; Jorjani, Hadi; Zavolan, Mihaela
2013
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing
Genome biology
2261959
Gruber, Andreas R.; Martin, Georges; Keller, Walter; Zavolan, Mihaela
2013
Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors
Wiley Interdisciplinary Reviews. RNA
2055452
Zünd, David; Gruber, Andreas R; Zavolan, Mihaela; Mühlemann, Oliver
2013
Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs
Nature structural & molecular biology
1471067
Gruber, Andreas R.; Martin, Georges; Keller, Walter; Zavolan, Mihaela
2012
Cleavage factor Im is a key regulator of 3' UTR length
RNA Biology
1213457
Martin, Georges; Gruber, Andreas R.; Keller, Walter; Zavolan, Mihaela
2012
Genome-wide Analysis of Pre-mRNA 3′ End Processing Reveals a Decisive Role of Human Cleavage Factor I in the Regulation of 3′ UTR Length
Cell Reports
Showing records 1 - 19 (of 19)